Welcome to ngesh’ documentation!

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ngesh is a Python library and command-line tool for simulating phylogenetic trees and related data (characters, states, branch length, etc.). It is intended for benchmarking phylogenetic methods, especially in historical linguistics and stemmatology. The generation of stochastic phylogenetic trees also goes by the name of “simulation methods for phylogenetic trees”, “synthetic data”, or just “phylogenetic tree simulation”.

ngesh

Indices and tables